PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do016755.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 332aa    MW: 35730.6 Da    PI: 6.9791
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do016755.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.9e-10164222563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+     l++e+
  Do016755.1 164 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTTGLTAEN 222
                 9********************************************99998877777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-15160224IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978162225IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.89E-11164216No hitNo description
Gene3DG3DSA:1.20.5.1704.9E-11164218No hitNo description
PfamPF001706.0E-9164218IPR004827Basic-leucine zipper domain
CDDcd147031.52E-23165214No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MDPRFPLPAA PAPSSGGAPA PRGHHRRAHS ETFLRFPDAD LLLDPDGDFS FSDLDFPSLS  60
DDSPAASDPT PPPPPPQAAP APAPRPPGGS HTRSLSLDAA FFEGLALQGP GSSGGGVGHK  120
RSGSMDGASS PFEGESALSS GLPDYAKKAM PAERIAELAL IDPKRAKRIL ANRQSAARSK  180
ERKIKYTSEL ERKVQTLQTE ATTLSAQLTL LQRDTTGLTA ENRELKLRLQ SMEEQAKLRD  240
ALNEALREEV QRLKIAAGQA VNMNGNPFNG GLQQQIPSYF AQQQQQQQQQ QMSYFGGHQT  300
QHHSHNHHHQ SPSNGGQSLS GQSSLSDSMD FI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0394040.0BT039404.1 Zea mays full-length cDNA clone ZM_BFc0012D19 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002441871.11e-175hypothetical protein SORBIDRAFT_08g003940
SwissprotQ9MA751e-74VIP1_ARATH; Transcription factor VIP1
TrEMBLC5YS971e-175C5YS97_SORBI; Putative uncharacterized protein Sb08g003940
STRINGSb08g003940.11e-174(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.16e-45VIRE2-interacting protein 1